<blockquote>
  <p>Is this behavior-as-intended (i.e. the feature is intended for marking duplicates within one site, and cross-posted duplicates should be reported some other way)</p>
</blockquote>

<p>Yes. In a general sense, it's actually <em>fine</em> to have questions "duplicated" across sites - provided they're addressing different audiences. Of course, if a question is off-topic, or if a user is simply re-posting the exact same question on multiple sites (cross-posting), it should be migrated to the site where it's most on-topic and dealt with there. </p>

<h3>See also: <a href="http://meta.stackexchange.com/questions/4708/what-to-do-with-cross-site-duplicates">What to do with cross-site duplicates?</a></h3>